STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilTTwitching mobility protein. (379 aa)    
Predicted Functional Partners:
epsF
Type II secretion system protein F.
 
  
 0.966
KJL34294.1
Competence protein A.
 
   
 0.955
comC
Type 4 prepilin-like proteins leader peptide-processing enzyme.
 
   
 0.933
KJL34292.1
Hypothetical protein.
  
  
 0.836
KJL34293.1
Hypothetical protein.
  
  
 0.833
KJL34296.1
Hypothetical protein.
     
 0.744
KJL34298.1
Hypothetical protein.
       0.699
KJL34297.1
Hypothetical protein.
       0.684
KJL34299.1
Putative major pilin subunit.
  
  
 0.606
epsE_2
Type II secretion system protein E.
 
  
0.531
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.