STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhIVGlucose 1-dehydrogenase 4. (268 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase [NADPH] large chain.
     
 0.738
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
  0.729
sadH
Putative oxidoreductase SadH.
  
 
  0.716
KJL33141.1
Molybdenum cofactor biosynthesis protein F.
 
   0.711
ptsI
Phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
   
 
 0.705
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
   
 0.687
xecD_2
2-(R)-hydroxypropyl-CoM dehydrogenase.
 
    
0.673
fabF_1
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.660
bdcA
Cyclic-di-GMP-binding biofilm dispersal mediator protein.
  
     0.660
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.657
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.