Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL32207.1 | KJL32209.1 | RS86_02678 | RS86_02680 | Heparinase II/III-like protein. | Hypothetical protein. | 0.935 |
KJL32207.1 | araN_2 | RS86_02678 | RS86_02676 | Heparinase II/III-like protein. | Putative arabinose-binding protein precursor. | 0.731 |
KJL32207.1 | araR | RS86_02678 | RS86_02679 | Heparinase II/III-like protein. | Arabinose metabolism transcriptional repressor. | 0.926 |
KJL32207.1 | serA_2 | RS86_02678 | RS86_02677 | Heparinase II/III-like protein. | D-3-phosphoglycerate dehydrogenase. | 0.811 |
KJL32209.1 | KJL32207.1 | RS86_02680 | RS86_02678 | Hypothetical protein. | Heparinase II/III-like protein. | 0.935 |
KJL32209.1 | araN_2 | RS86_02680 | RS86_02676 | Hypothetical protein. | Putative arabinose-binding protein precursor. | 0.709 |
KJL32209.1 | araR | RS86_02680 | RS86_02679 | Hypothetical protein. | Arabinose metabolism transcriptional repressor. | 0.934 |
KJL32209.1 | serA_2 | RS86_02680 | RS86_02677 | Hypothetical protein. | D-3-phosphoglycerate dehydrogenase. | 0.876 |
araN_2 | KJL32207.1 | RS86_02676 | RS86_02678 | Putative arabinose-binding protein precursor. | Heparinase II/III-like protein. | 0.731 |
araN_2 | KJL32209.1 | RS86_02676 | RS86_02680 | Putative arabinose-binding protein precursor. | Hypothetical protein. | 0.709 |
araN_2 | araR | RS86_02676 | RS86_02679 | Putative arabinose-binding protein precursor. | Arabinose metabolism transcriptional repressor. | 0.772 |
araN_2 | serA_2 | RS86_02676 | RS86_02677 | Putative arabinose-binding protein precursor. | D-3-phosphoglycerate dehydrogenase. | 0.731 |
araR | KJL32207.1 | RS86_02679 | RS86_02678 | Arabinose metabolism transcriptional repressor. | Heparinase II/III-like protein. | 0.926 |
araR | KJL32209.1 | RS86_02679 | RS86_02680 | Arabinose metabolism transcriptional repressor. | Hypothetical protein. | 0.934 |
araR | araN_2 | RS86_02679 | RS86_02676 | Arabinose metabolism transcriptional repressor. | Putative arabinose-binding protein precursor. | 0.772 |
araR | degA_2 | RS86_02679 | RS86_00654 | Arabinose metabolism transcriptional repressor. | HTH-type transcriptional regulator DegA. | 0.743 |
araR | galS_1 | RS86_02679 | RS86_00651 | Arabinose metabolism transcriptional repressor. | HTH-type transcriptional regulator GalS. | 0.693 |
araR | gltB_1 | RS86_02679 | RS86_03032 | Arabinose metabolism transcriptional repressor. | Glutamate synthase [NADPH] large chain. | 0.736 |
araR | lacI_3 | RS86_02679 | RS86_01610 | Arabinose metabolism transcriptional repressor. | Lactose operon repressor. | 0.683 |
araR | ptsI | RS86_02679 | RS86_01826 | Arabinose metabolism transcriptional repressor. | Phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family. | 0.805 |
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