STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catECatechol-2,3-dioxygenase. (290 aa)    
Predicted Functional Partners:
pcpB_1
Pentachlorophenol 4-monooxygenase.
    
  0.881
bphC_1
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
  
 
  0.881
bphC_2
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
  
 
  0.770
KJL31307.1
Dioxygenase.
     
 0.737
tfdB_1
2,4-dichlorophenol 6-monooxygenase.
    
  0.625
tfdB_2
2,4-dichlorophenol 6-monooxygenase.
    
  0.625
pcpB_2
Pentachlorophenol 4-monooxygenase.
    
  0.625
rutD_2
Putative aminoacrylate hydrolase RutD.
  
 
  0.603
limB_3
Limonene 1,2-monooxygenase.
 
    0.544
ydbM
Putative acyl-CoA dehydrogenase YdbM.
  
 
  0.432
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.