STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL32259.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
KJL32260.1
Hypothetical protein.
 
 
   0.965
KJL32258.1
HIT domain protein.
  
    0.793
KJL32261.1
Hypothetical protein.
       0.538
gyrB_1
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
    
 
 0.524
gyrB_2
DNA gyrase subunit B.
    
 
 0.524
KJL34128.1
Hypothetical protein.
    
   0.457
KJL33500.1
Hypothetical protein.
    
   0.457
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.453
yfkN_2
Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family.
   
   0.447
KJL37250.1
Hypothetical protein.
    
   0.439
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.