Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL34182.1 | citT_1 | RS86_01283 | RS86_01287 | Tripartite tricarboxylate transporter family receptor. | Transcriptional regulatory protein CitT. | 0.806 |
KJL34182.1 | citT_2 | RS86_01283 | RS86_02786 | Tripartite tricarboxylate transporter family receptor. | Transcriptional regulatory protein CitT. | 0.463 |
KJL34182.1 | dcuR | RS86_01283 | RS86_03771 | Tripartite tricarboxylate transporter family receptor. | Transcriptional regulatory protein DcuR. | 0.481 |
KJL34182.1 | dcuS_3 | RS86_01283 | RS86_02785 | Tripartite tricarboxylate transporter family receptor. | Sensor histidine kinase DcuS. | 0.415 |
KJL34182.1 | dpiA | RS86_01283 | RS86_02604 | Tripartite tricarboxylate transporter family receptor. | Transcriptional regulatory protein DpiA. | 0.491 |
citN | citT_2 | RS86_02784 | RS86_02786 | Citrate transporter. | Transcriptional regulatory protein CitT. | 0.777 |
citN | dcuS_3 | RS86_02784 | RS86_02785 | Citrate transporter. | Sensor histidine kinase DcuS. | 0.838 |
citT_1 | KJL34182.1 | RS86_01287 | RS86_01283 | Transcriptional regulatory protein CitT. | Tripartite tricarboxylate transporter family receptor. | 0.806 |
citT_1 | dctA | RS86_01287 | RS86_03769 | Transcriptional regulatory protein CitT. | Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.404 |
citT_1 | dcuS_3 | RS86_01287 | RS86_02785 | Transcriptional regulatory protein CitT. | Sensor histidine kinase DcuS. | 0.907 |
citT_2 | KJL34182.1 | RS86_02786 | RS86_01283 | Transcriptional regulatory protein CitT. | Tripartite tricarboxylate transporter family receptor. | 0.463 |
citT_2 | citN | RS86_02786 | RS86_02784 | Transcriptional regulatory protein CitT. | Citrate transporter. | 0.777 |
citT_2 | dcuS_3 | RS86_02786 | RS86_02785 | Transcriptional regulatory protein CitT. | Sensor histidine kinase DcuS. | 0.980 |
dctA | citT_1 | RS86_03769 | RS86_01287 | Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Transcriptional regulatory protein CitT. | 0.404 |
dctA | dcuR | RS86_03769 | RS86_03771 | Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Transcriptional regulatory protein DcuR. | 0.737 |
dctA | dcuS_3 | RS86_03769 | RS86_02785 | Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Sensor histidine kinase DcuS. | 0.475 |
dcuR | KJL34182.1 | RS86_03771 | RS86_01283 | Transcriptional regulatory protein DcuR. | Tripartite tricarboxylate transporter family receptor. | 0.481 |
dcuR | dctA | RS86_03771 | RS86_03769 | Transcriptional regulatory protein DcuR. | Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.737 |
dcuR | dcuS_3 | RS86_03771 | RS86_02785 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase DcuS. | 0.915 |
dcuS_3 | KJL34182.1 | RS86_02785 | RS86_01283 | Sensor histidine kinase DcuS. | Tripartite tricarboxylate transporter family receptor. | 0.415 |
page 1 of 2