Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL31976.1 | KJL31977.1 | RS86_03257 | RS86_03258 | Hypothetical protein. | LysR substrate binding domain protein. | 0.473 |
KJL31977.1 | KJL31976.1 | RS86_03258 | RS86_03257 | LysR substrate binding domain protein. | Hypothetical protein. | 0.473 |
KJL31977.1 | ddlA | RS86_03258 | RS86_03259 | LysR substrate binding domain protein. | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.431 |
KJL31977.1 | gpsA | RS86_03258 | RS86_03260 | LysR substrate binding domain protein. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.431 |
KJL31977.1 | murA1 | RS86_03258 | RS86_03262 | LysR substrate binding domain protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.431 |
KJL31977.1 | plsC_2 | RS86_03258 | RS86_03261 | LysR substrate binding domain protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.431 |
ddlA | KJL31977.1 | RS86_03259 | RS86_03258 | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | LysR substrate binding domain protein. | 0.431 |
ddlA | gpsA | RS86_03259 | RS86_03260 | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.831 |
ddlA | murA1 | RS86_03259 | RS86_03262 | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.921 |
ddlA | plsC_2 | RS86_03259 | RS86_03261 | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.796 |
gpsA | KJL31977.1 | RS86_03260 | RS86_03258 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | LysR substrate binding domain protein. | 0.431 |
gpsA | ddlA | RS86_03260 | RS86_03259 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.831 |
gpsA | murA1 | RS86_03260 | RS86_03262 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.877 |
gpsA | plsC_2 | RS86_03260 | RS86_03261 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.980 |
murA1 | KJL31977.1 | RS86_03262 | RS86_03258 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | LysR substrate binding domain protein. | 0.431 |
murA1 | ddlA | RS86_03262 | RS86_03259 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.921 |
murA1 | gpsA | RS86_03262 | RS86_03260 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.877 |
murA1 | plsC_2 | RS86_03262 | RS86_03261 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.851 |
plsC_2 | KJL31977.1 | RS86_03261 | RS86_03258 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | LysR substrate binding domain protein. | 0.431 |
plsC_2 | ddlA | RS86_03261 | RS86_03259 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.796 |
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