Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL32324.1 | chiA | RS86_02796 | RS86_03297 | Hypothetical protein. | Putative bifunctional chitinase/lysozyme precursor. | 0.489 |
KJL32324.1 | guaA | RS86_02796 | RS86_03319 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.622 |
KJL33200.1 | chiA | RS86_01859 | RS86_03297 | Beta-N-acetylhexosaminidase. | Putative bifunctional chitinase/lysozyme precursor. | 0.660 |
KJL33701.1 | chiA | RS86_01498 | RS86_03297 | Hypothetical protein. | Putative bifunctional chitinase/lysozyme precursor. | 0.489 |
KJL33701.1 | guaA | RS86_01498 | RS86_03319 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.622 |
KJL34314.1 | chiA | RS86_01101 | RS86_03297 | Hypothetical protein. | Putative bifunctional chitinase/lysozyme precursor. | 0.489 |
KJL34314.1 | guaA | RS86_01101 | RS86_03319 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.622 |
KJL34463.1 | chiA | RS86_00949 | RS86_03297 | Endonuclease/Exonuclease/phosphatase family protein. | Putative bifunctional chitinase/lysozyme precursor. | 0.489 |
KJL34579.1 | chiA | RS86_00834 | RS86_03297 | Hypothetical protein. | Putative bifunctional chitinase/lysozyme precursor. | 0.489 |
KJL34579.1 | guaA | RS86_00834 | RS86_03319 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.622 |
chiA | KJL32324.1 | RS86_03297 | RS86_02796 | Putative bifunctional chitinase/lysozyme precursor. | Hypothetical protein. | 0.489 |
chiA | KJL33200.1 | RS86_03297 | RS86_01859 | Putative bifunctional chitinase/lysozyme precursor. | Beta-N-acetylhexosaminidase. | 0.660 |
chiA | KJL33701.1 | RS86_03297 | RS86_01498 | Putative bifunctional chitinase/lysozyme precursor. | Hypothetical protein. | 0.489 |
chiA | KJL34314.1 | RS86_03297 | RS86_01101 | Putative bifunctional chitinase/lysozyme precursor. | Hypothetical protein. | 0.489 |
chiA | KJL34463.1 | RS86_03297 | RS86_00949 | Putative bifunctional chitinase/lysozyme precursor. | Endonuclease/Exonuclease/phosphatase family protein. | 0.489 |
chiA | KJL34579.1 | RS86_03297 | RS86_00834 | Putative bifunctional chitinase/lysozyme precursor. | Hypothetical protein. | 0.489 |
chiA | endOF2 | RS86_03297 | RS86_01046 | Putative bifunctional chitinase/lysozyme precursor. | Endo-beta-N-acetylglucosaminidase F2 precursor. | 0.549 |
chiA | exo | RS86_03297 | RS86_01424 | Putative bifunctional chitinase/lysozyme precursor. | Beta-hexosaminidase. | 0.660 |
chiA | guaA | RS86_03297 | RS86_03319 | Putative bifunctional chitinase/lysozyme precursor. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.518 |
chiA | ybbD_2 | RS86_03297 | RS86_02517 | Putative bifunctional chitinase/lysozyme precursor. | Putative lipoprotein YbbD precursor. | 0.709 |
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