Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL31183.1 | KJL31187.1 | RS86_03299 | RS86_03303 | Hypothetical protein. | Hypothetical protein. | 0.556 |
KJL31183.1 | KJL31188.1 | RS86_03299 | RS86_03304 | Hypothetical protein. | Hypothetical protein. | 0.556 |
KJL31183.1 | mshD_3 | RS86_03299 | RS86_03301 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.556 |
KJL31183.1 | osgepl1 | RS86_03299 | RS86_03300 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial. | 0.556 |
KJL31183.1 | phoR_2 | RS86_03299 | RS86_03298 | Hypothetical protein. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.828 |
KJL31183.1 | tsaD | RS86_03299 | RS86_03302 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.592 |
KJL31187.1 | KJL31183.1 | RS86_03303 | RS86_03299 | Hypothetical protein. | Hypothetical protein. | 0.556 |
KJL31187.1 | KJL31188.1 | RS86_03303 | RS86_03304 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL31187.1 | mshD_3 | RS86_03303 | RS86_03301 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.778 |
KJL31187.1 | osgepl1 | RS86_03303 | RS86_03300 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial. | 0.782 |
KJL31187.1 | phoR_2 | RS86_03303 | RS86_03298 | Hypothetical protein. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.556 |
KJL31187.1 | tsaD | RS86_03303 | RS86_03302 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.783 |
KJL31188.1 | KJL31183.1 | RS86_03304 | RS86_03299 | Hypothetical protein. | Hypothetical protein. | 0.556 |
KJL31188.1 | KJL31187.1 | RS86_03304 | RS86_03303 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KJL31188.1 | mshD_3 | RS86_03304 | RS86_03301 | Hypothetical protein. | Mycothiol acetyltransferase. | 0.773 |
KJL31188.1 | osgepl1 | RS86_03304 | RS86_03300 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial. | 0.773 |
KJL31188.1 | phoR_2 | RS86_03304 | RS86_03298 | Hypothetical protein. | Alkaline phosphatase synthesis sensor protein PhoR. | 0.556 |
KJL31188.1 | tsaD | RS86_03304 | RS86_03302 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.773 |
alr_4 | osgepl1 | RS86_02902 | RS86_03300 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial. | 0.954 |
alr_4 | tsaD | RS86_02902 | RS86_03302 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.874 |
page 1 of 4