Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL31235.1 | KJL31236.1 | RS86_03351 | RS86_03352 | Hypothetical protein. | Type III restriction enzyme, res subunit. | 0.829 |
KJL31235.1 | tgpA | RS86_03351 | RS86_03353 | Hypothetical protein. | Protein-glutamine gamma-glutamyltransferase. | 0.435 |
KJL31236.1 | KJL31235.1 | RS86_03352 | RS86_03351 | Type III restriction enzyme, res subunit. | Hypothetical protein. | 0.829 |
KJL31236.1 | KJL32128.1 | RS86_03352 | RS86_02597 | Type III restriction enzyme, res subunit. | Hypothetical protein. | 0.586 |
KJL31236.1 | KJL32322.1 | RS86_03352 | RS86_02794 | Type III restriction enzyme, res subunit. | Glyoxalase-like domain protein. | 0.567 |
KJL31236.1 | KJL33487.1 | RS86_03352 | RS86_01708 | Type III restriction enzyme, res subunit. | Calcineurin-like phosphoesterase. | 0.711 |
KJL31236.1 | KJL33884.1 | RS86_03352 | RS86_01320 | Type III restriction enzyme, res subunit. | Hypothetical protein. | 0.599 |
KJL31236.1 | KJL35184.1 | RS86_03352 | RS86_00567 | Type III restriction enzyme, res subunit. | Cupin domain protein. | 0.560 |
KJL31236.1 | mtnN | RS86_03352 | RS86_02821 | Type III restriction enzyme, res subunit. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. | 0.560 |
KJL31236.1 | rbsB_2 | RS86_03352 | RS86_01322 | Type III restriction enzyme, res subunit. | D-ribose-binding periplasmic protein precursor. | 0.504 |
KJL31236.1 | tgpA | RS86_03352 | RS86_03353 | Type III restriction enzyme, res subunit. | Protein-glutamine gamma-glutamyltransferase. | 0.551 |
KJL31236.1 | yesO | RS86_03352 | RS86_03679 | Type III restriction enzyme, res subunit. | Putative ABC transporter substrate-binding protein YesO. | 0.546 |
KJL32128.1 | KJL31236.1 | RS86_02597 | RS86_03352 | Hypothetical protein. | Type III restriction enzyme, res subunit. | 0.586 |
KJL32128.1 | KJL33487.1 | RS86_02597 | RS86_01708 | Hypothetical protein. | Calcineurin-like phosphoesterase. | 0.741 |
KJL32128.1 | KJL33884.1 | RS86_02597 | RS86_01320 | Hypothetical protein. | Hypothetical protein. | 0.642 |
KJL32128.1 | mtnN | RS86_02597 | RS86_02821 | Hypothetical protein. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. | 0.590 |
KJL32128.1 | rbsB_2 | RS86_02597 | RS86_01322 | Hypothetical protein. | D-ribose-binding periplasmic protein precursor. | 0.487 |
KJL32128.1 | yesO | RS86_02597 | RS86_03679 | Hypothetical protein. | Putative ABC transporter substrate-binding protein YesO. | 0.591 |
KJL32322.1 | KJL31236.1 | RS86_02794 | RS86_03352 | Glyoxalase-like domain protein. | Type III restriction enzyme, res subunit. | 0.567 |
KJL32322.1 | KJL33487.1 | RS86_02794 | RS86_01708 | Glyoxalase-like domain protein. | Calcineurin-like phosphoesterase. | 0.501 |
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