STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kipAKipI antagonist. (332 aa)    
Predicted Functional Partners:
kipI
Kinase A inhibitor.
 
 0.999
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.986
accA1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
   0.947
accC
Biotin carboxylase.
 
   0.936
sdh_3
Serine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
KJL30690.1
4-hydroxy-4-methyl-2-oxoglutarate aldolase.
       0.772
ghrA
Glyoxylate/hydroxypyruvate reductase A.
       0.768
KJL30689.1
Aspartate aminotransferase.
       0.768
KJL30684.1
Hypothetical protein.
       0.717
gntK_3
Thermoresistant gluconokinase.
       0.717
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
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