Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJL30742.1 | KJL30746.1 | RS86_03684 | RS86_03688 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 4-sulfomuconolactone hydrolase. | 0.968 |
KJL30742.1 | dgoD_2 | RS86_03684 | RS86_01540 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.515 |
KJL30742.1 | fdh_2 | RS86_03684 | RS86_03683 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | D-threo-aldose 1-dehydrogenase. | 0.923 |
KJL30742.1 | xecE | RS86_03684 | RS86_03686 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-(S)-hydroxypropyl-CoM dehydrogenase. | 0.809 |
KJL30746.1 | KJL30742.1 | RS86_03688 | RS86_03684 | 4-sulfomuconolactone hydrolase. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.968 |
KJL30746.1 | dgoD_2 | RS86_03688 | RS86_01540 | 4-sulfomuconolactone hydrolase. | D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.503 |
KJL30746.1 | fbpA | RS86_03688 | RS86_03689 | 4-sulfomuconolactone hydrolase. | Fe(3+)-binding periplasmic protein precursor. | 0.488 |
KJL30746.1 | fdh_2 | RS86_03688 | RS86_03683 | 4-sulfomuconolactone hydrolase. | D-threo-aldose 1-dehydrogenase. | 0.966 |
KJL30746.1 | galD | RS86_03688 | RS86_02534 | 4-sulfomuconolactone hydrolase. | 4-oxalomesaconate tautomerase. | 0.505 |
KJL30746.1 | lutR_7 | RS86_03688 | RS86_03687 | 4-sulfomuconolactone hydrolase. | HTH-type transcriptional regulator LutR. | 0.705 |
KJL30746.1 | paaE | RS86_03688 | RS86_01962 | 4-sulfomuconolactone hydrolase. | 1,2-phenylacetyl-CoA epoxidase, subunit E. | 0.769 |
KJL30746.1 | rhaM | RS86_03688 | RS86_02000 | 4-sulfomuconolactone hydrolase. | L-rhamnose mutarotase. | 0.513 |
KJL30746.1 | xecE | RS86_03688 | RS86_03686 | 4-sulfomuconolactone hydrolase. | 2-(S)-hydroxypropyl-CoM dehydrogenase. | 0.558 |
KJL30746.1 | ybjJ | RS86_03688 | RS86_01177 | 4-sulfomuconolactone hydrolase. | Inner membrane protein YbjJ. | 0.570 |
dgoD_2 | KJL30742.1 | RS86_01540 | RS86_03684 | D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.515 |
dgoD_2 | KJL30746.1 | RS86_01540 | RS86_03688 | D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 4-sulfomuconolactone hydrolase. | 0.503 |
fbpA | KJL30746.1 | RS86_03689 | RS86_03688 | Fe(3+)-binding periplasmic protein precursor. | 4-sulfomuconolactone hydrolase. | 0.488 |
fdh_2 | KJL30742.1 | RS86_03683 | RS86_03684 | D-threo-aldose 1-dehydrogenase. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.923 |
fdh_2 | KJL30746.1 | RS86_03683 | RS86_03688 | D-threo-aldose 1-dehydrogenase. | 4-sulfomuconolactone hydrolase. | 0.966 |
fdh_2 | xecE | RS86_03683 | RS86_03686 | D-threo-aldose 1-dehydrogenase. | 2-(S)-hydroxypropyl-CoM dehydrogenase. | 0.773 |
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