STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpA_2Sn-glycerol-3-phosphate transport system permease protein UgpA. (340 aa)    
Predicted Functional Partners:
KJL30937.1
Bacterial extracellular solute-binding protein.
 
 0.994
sugB_2
Trehalose transport system permease protein SugB.
 
 0.978
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.966
ycjP_2
Inner membrane ABC transporter permease protein YcjP.
 
 0.945
ycjP_4
Inner membrane ABC transporter permease protein YcjP.
 
 0.926
araQ_5
L-arabinose transport system permease protein AraQ.
  
 0.889
araQ_7
L-arabinose transport system permease protein AraQ.
  
 0.886
araQ_11
L-arabinose transport system permease protein AraQ.
  
 0.884
gmhA
Phosphoheptose isomerase.
 
     0.878
araQ_19
L-arabinose transport system permease protein AraQ.
  
 0.871
Your Current Organism:
Microbacterium azadirachtae
NCBI taxonomy Id: 582680
Other names: DSM 23848, JCM 15681, KCTC 19668, LMG 24772, LMG:24772, M. azadirachtae, Microbacterium azadirachtae Madhaiyan et al. 2010, Microbacterium sp. AI-S262, strain AI-S262
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