STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY58337.1ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain. (740 aa)    
Predicted Functional Partners:
SCY58354.1
Type 2 lantibiotic biosynthesis protein LanM.
 
   
 0.952
SCY87090.1
ATP-binding cassette, subfamily B.
 
 
 
0.802
SCY87081.1
ATP-binding cassette, subfamily B.
 
 
 
0.801
SCZ09004.1
ATP-binding cassette, subfamily B.
 
 
 
0.797
SCZ06226.1
ATP-binding cassette, subfamily B.
 
 
 
0.795
SCZ09010.1
ATP-binding cassette, subfamily B.
 
 
 
0.794
SCY51326.1
ATP-binding cassette, subfamily B.
 
 
 
0.793
SCY25851.1
ATP-binding cassette, subfamily B.
 
 
 
0.787
SCY25877.1
ATP-binding cassette, subfamily B.
 
 
 
0.787
SCY37088.1
ATP-binding cassette, subfamily B.
 
 
 
0.787
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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