STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY59575.1GAF domain-containing protein. (141 aa)    
Predicted Functional Partners:
SCY63713.1
Uroporphyrinogen III methyltransferase / synthase.
    
  0.813
SCY20790.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.794
SCY59622.1
PAS domain S-box-containing protein.
 
 
 0.755
SCY59600.1
Two component transcriptional regulator, LuxR family.
 
 0.738
SCX91654.1
Phosphocarrier protein.
    
 0.728
SCY11835.1
Phosphocarrier protein.
    
 0.728
SCZ02024.1
Phosphocarrier protein.
    
 0.728
SCZ13123.1
Catabolite repression HPr-like protein.
    
 0.728
SCY24448.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
  
 0.683
moaA-2
Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
  0.572
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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