Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX83273.1 | SCY39821.1 | SAMN05720606_101165 | SAMN05720606_104250 | Amino acid adenylation domain-containing protein. | Uncharacterized protein YjbI, contains pentapeptide repeats. | 0.779 |
SCX83273.1 | SCY49098.1 | SAMN05720606_101165 | SAMN05720606_105205 | Amino acid adenylation domain-containing protein. | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | 0.727 |
SCX83273.1 | SCY85299.1 | SAMN05720606_101165 | SAMN05720606_110191 | Amino acid adenylation domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.701 |
SCX83273.1 | SCY85309.1 | SAMN05720606_101165 | SAMN05720606_110192 | Amino acid adenylation domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.792 |
SCX83273.1 | SCY85340.1 | SAMN05720606_101165 | SAMN05720606_110194 | Amino acid adenylation domain-containing protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.606 |
SCX83273.1 | SCY96757.1 | SAMN05720606_101165 | SAMN05720606_113178 | Amino acid adenylation domain-containing protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.727 |
SCX83273.1 | ribBA | SAMN05720606_101165 | SAMN05720606_11255 | Amino acid adenylation domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.568 |
SCY39821.1 | SCX83273.1 | SAMN05720606_104250 | SAMN05720606_101165 | Uncharacterized protein YjbI, contains pentapeptide repeats. | Amino acid adenylation domain-containing protein. | 0.779 |
SCY39821.1 | SCY85299.1 | SAMN05720606_104250 | SAMN05720606_110191 | Uncharacterized protein YjbI, contains pentapeptide repeats. | Tetratricopeptide repeat-containing protein. | 0.734 |
SCY39821.1 | SCY85309.1 | SAMN05720606_104250 | SAMN05720606_110192 | Uncharacterized protein YjbI, contains pentapeptide repeats. | Glycosyltransferase involved in cell wall bisynthesis. | 0.539 |
SCY39821.1 | ribBA | SAMN05720606_104250 | SAMN05720606_11255 | Uncharacterized protein YjbI, contains pentapeptide repeats. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.708 |
SCY49098.1 | SCX83273.1 | SAMN05720606_105205 | SAMN05720606_101165 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Amino acid adenylation domain-containing protein. | 0.727 |
SCY49098.1 | SCY85299.1 | SAMN05720606_105205 | SAMN05720606_110191 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Tetratricopeptide repeat-containing protein. | 0.778 |
SCY49098.1 | SCY85309.1 | SAMN05720606_105205 | SAMN05720606_110192 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Glycosyltransferase involved in cell wall bisynthesis. | 0.645 |
SCY49098.1 | SCY85340.1 | SAMN05720606_105205 | SAMN05720606_110194 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Glycosyltransferase involved in cell wall bisynthesis. | 0.568 |
SCY49098.1 | SCY96757.1 | SAMN05720606_105205 | SAMN05720606_113178 | Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). | Undecaprenyl-phosphate glucose phosphotransferase. | 0.925 |
SCY54456.1 | SCY85299.1 | SAMN05720606_10620 | SAMN05720606_110191 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.637 |
SCY85286.1 | SCY85299.1 | SAMN05720606_110190 | SAMN05720606_110191 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.863 |
SCY85286.1 | SCY85309.1 | SAMN05720606_110190 | SAMN05720606_110192 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.845 |
SCY85286.1 | SCY85340.1 | SAMN05720606_110190 | SAMN05720606_110194 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.649 |
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