STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY85299.1Tetratricopeptide repeat-containing protein. (816 aa)    
Predicted Functional Partners:
SCY85309.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
0.940
SCY85286.1
Hypothetical protein.
 
     0.863
SCY85340.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.844
SCY96757.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.780
SCY49098.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.778
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.767
SCY39821.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
  
 
 0.734
SCX83273.1
Amino acid adenylation domain-containing protein.
  
 0.701
SCY54456.1
Hypothetical protein.
   
 
 0.637
SCZ03214.1
Hypothetical protein.
   
 
 0.637
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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