STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY87412.1Ribosomal-protein-alanine N-acetyltransferase. (195 aa)    
Predicted Functional Partners:
SCZ07564.1
Ribosomal-protein-serine acetyltransferase.
  
     0.742
SCY87424.1
Hypothetical protein.
       0.701
SCY87435.1
Hypothetical protein.
       0.701
SCY87394.1
Hypothetical protein.
       0.655
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.654
SCY87451.1
Hypothetical protein.
       0.630
SCY49334.1
Glutamate synthase (ferredoxin).
   
 
 0.629
SCY05254.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.620
SCY97871.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.611
SCY87382.1
Dihydrofolate reductase.
       0.414
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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