Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX90382.1 | SCY87787.1 | SAMN05720606_101403 | SAMN05720606_11158 | Hypothetical protein. | Iron complex transport system substrate-binding protein. | 0.402 |
SCX90382.1 | SCY87803.1 | SAMN05720606_101403 | SAMN05720606_11159 | Hypothetical protein. | Ferric iron reductase protein FhuF, involved in iron transport. | 0.743 |
SCX90382.1 | SCY87899.1 | SAMN05720606_101403 | SAMN05720606_11165 | Hypothetical protein. | Iron complex transport system substrate-binding protein. | 0.745 |
SCY03454.1 | SCY40114.1 | SAMN05720606_102134 | SAMN05720606_104261 | Transcriptional regulator, AraC family. | AraC-type DNA-binding protein. | 0.719 |
SCY03454.1 | SCY68274.1 | SAMN05720606_102134 | SAMN05720606_107259 | Transcriptional regulator, AraC family. | AraC-type DNA-binding protein. | 0.413 |
SCY03454.1 | SCY78742.1 | SAMN05720606_102134 | SAMN05720606_109122 | Transcriptional regulator, AraC family. | AraC-type DNA-binding protein. | 0.489 |
SCY03454.1 | SCY87899.1 | SAMN05720606_102134 | SAMN05720606_11165 | Transcriptional regulator, AraC family. | Iron complex transport system substrate-binding protein. | 0.778 |
SCY35086.1 | SCY87787.1 | SAMN05720606_10486 | SAMN05720606_11158 | Iron complex transport system ATP-binding protein. | Iron complex transport system substrate-binding protein. | 0.942 |
SCY35086.1 | SCY87899.1 | SAMN05720606_10486 | SAMN05720606_11165 | Iron complex transport system ATP-binding protein. | Iron complex transport system substrate-binding protein. | 0.741 |
SCY40114.1 | SCY03454.1 | SAMN05720606_104261 | SAMN05720606_102134 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.719 |
SCY40114.1 | SCY78742.1 | SAMN05720606_104261 | SAMN05720606_109122 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.718 |
SCY40114.1 | SCY87899.1 | SAMN05720606_104261 | SAMN05720606_11165 | AraC-type DNA-binding protein. | Iron complex transport system substrate-binding protein. | 0.784 |
SCY45304.1 | SCY45430.1 | SAMN05720606_10549 | SAMN05720606_10555 | Iron complex transport system ATP-binding protein. | Adenosylcobinamide amidohydrolase. | 0.572 |
SCY45304.1 | SCY87787.1 | SAMN05720606_10549 | SAMN05720606_11158 | Iron complex transport system ATP-binding protein. | Iron complex transport system substrate-binding protein. | 0.846 |
SCY45304.1 | SCY87899.1 | SAMN05720606_10549 | SAMN05720606_11165 | Iron complex transport system ATP-binding protein. | Iron complex transport system substrate-binding protein. | 0.741 |
SCY45430.1 | SCY45304.1 | SAMN05720606_10555 | SAMN05720606_10549 | Adenosylcobinamide amidohydrolase. | Iron complex transport system ATP-binding protein. | 0.572 |
SCY45430.1 | SCY87787.1 | SAMN05720606_10555 | SAMN05720606_11158 | Adenosylcobinamide amidohydrolase. | Iron complex transport system substrate-binding protein. | 0.733 |
SCY45430.1 | SCY87899.1 | SAMN05720606_10555 | SAMN05720606_11165 | Adenosylcobinamide amidohydrolase. | Iron complex transport system substrate-binding protein. | 0.791 |
SCY68274.1 | SCY03454.1 | SAMN05720606_107259 | SAMN05720606_102134 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.413 |
SCY68274.1 | SCY78742.1 | SAMN05720606_107259 | SAMN05720606_109122 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.408 |
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