STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY87912.1S-layer homology domain-containing protein. (1202 aa)    
Predicted Functional Partners:
SCY54228.1
Putative transposase.
  
     0.768
SCY54205.1
TniB protein.
 
     0.766
SCY54249.1
TnsA endonuclease N terminal.
  
     0.760
SCY56598.1
S-layer homology domain-containing protein.
  
 
  0.729
SCY39634.1
SS-A/Ro ribonucleoprotein.
  
     0.689
SCX81127.1
TniQ protein.
  
     0.685
SCX81072.1
TniB protein.
  
     0.636
SCY17827.1
Aminoglycoside phosphotransferase.
  
     0.615
SCY96495.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
  0.600
SCX84597.1
Protein of unknown function.
   
  0.595
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.