STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY95112.1Dihydropyrimidinase. (481 aa)    
Predicted Functional Partners:
SCY95102.1
Dihydroorotate oxidase B, catalytic subunit.
 
 0.999
SCY95086.1
N-carbamoylputrescine amidase.
 
 0.992
SCY95094.1
Glutamate synthase (NADPH/NADH) small chain.
 
 
 0.989
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 0.980
SCY95073.1
Allantoate deiminase/N-carbamoyl-L-amino-acid hydrolase.
 
 
 0.950
SCY96397.1
Allantoate deiminase.
 
 
 0.923
pyrR
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
  
 
 0.910
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 
 0.892
pyrD
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.878
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.860
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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