Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY17521.1 | SCZ05924.1 | SAMN05720606_1037 | SAMN05720606_11852 | Hypothetical protein. | Transporter family-2 protein. | 0.435 |
SCY17521.1 | SCZ05933.1 | SAMN05720606_1037 | SAMN05720606_11853 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.442 |
SCY17521.1 | SCZ05938.1 | SAMN05720606_1037 | SAMN05720606_11854 | Hypothetical protein. | Transporter family-2 protein. | 0.498 |
SCY84085.1 | SCY95102.1 | SAMN05720606_110108 | SAMN05720606_11325 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Dihydroorotate oxidase B, catalytic subunit. | 0.457 |
SCY84085.1 | SCZ05924.1 | SAMN05720606_110108 | SAMN05720606_11852 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Transporter family-2 protein. | 0.641 |
SCY84085.1 | SCZ05938.1 | SAMN05720606_110108 | SAMN05720606_11854 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Transporter family-2 protein. | 0.662 |
SCY93797.1 | SCZ05924.1 | SAMN05720606_112204 | SAMN05720606_11852 | Hypothetical protein. | Transporter family-2 protein. | 0.435 |
SCY93797.1 | SCZ05938.1 | SAMN05720606_112204 | SAMN05720606_11854 | Hypothetical protein. | Transporter family-2 protein. | 0.493 |
SCY95102.1 | SCY84085.1 | SAMN05720606_11325 | SAMN05720606_110108 | Dihydroorotate oxidase B, catalytic subunit. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.457 |
SCY95102.1 | SCZ05924.1 | SAMN05720606_11325 | SAMN05720606_11852 | Dihydroorotate oxidase B, catalytic subunit. | Transporter family-2 protein. | 0.523 |
SCY95102.1 | SCZ05933.1 | SAMN05720606_11325 | SAMN05720606_11853 | Dihydroorotate oxidase B, catalytic subunit. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.457 |
SCY95102.1 | SCZ05938.1 | SAMN05720606_11325 | SAMN05720606_11854 | Dihydroorotate oxidase B, catalytic subunit. | Transporter family-2 protein. | 0.523 |
SCY95102.1 | pyrD | SAMN05720606_11325 | SAMN05720606_12748 | Dihydroorotate oxidase B, catalytic subunit. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.454 |
SCY95102.1 | pyrE | SAMN05720606_11325 | SAMN05720606_116120 | Dihydroorotate oxidase B, catalytic subunit. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.971 |
SCY95102.1 | pyrF | SAMN05720606_11325 | SAMN05720606_116121 | Dihydroorotate oxidase B, catalytic subunit. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.928 |
SCZ05924.1 | SCY17521.1 | SAMN05720606_11852 | SAMN05720606_1037 | Transporter family-2 protein. | Hypothetical protein. | 0.435 |
SCZ05924.1 | SCY84085.1 | SAMN05720606_11852 | SAMN05720606_110108 | Transporter family-2 protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.641 |
SCZ05924.1 | SCY93797.1 | SAMN05720606_11852 | SAMN05720606_112204 | Transporter family-2 protein. | Hypothetical protein. | 0.435 |
SCZ05924.1 | SCY95102.1 | SAMN05720606_11852 | SAMN05720606_11325 | Transporter family-2 protein. | Dihydroorotate oxidase B, catalytic subunit. | 0.523 |
SCZ05924.1 | SCZ05933.1 | SAMN05720606_11852 | SAMN05720606_11853 | Transporter family-2 protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.954 |
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