STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ08127.1Predicted dehydrogenase. (352 aa)    
Predicted Functional Partners:
SCZ08132.1
Sugar phosphate isomerase/epimerase.
 
 
  0.922
SCZ08071.1
Sugar phosphate isomerase/epimerase.
 
 
  0.861
SCZ08078.1
Sugar phosphate isomerase/epimerase.
 
 
  0.823
SCZ14665.1
Inosose dehydratase.
 
 
 0.767
SCY93308.1
Sugar phosphate isomerase/epimerase.
 
  0.762
SCZ08932.1
Sugar phosphate isomerase/epimerase.
  
 
  0.703
SCX89134.1
Sugar phosphate isomerase/epimerase.
 
 
  0.580
SCZ14643.1
5-deoxyglucuronate isomerase.
 
  
 0.573
SCZ14669.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
  
 0.569
SCX92153.1
2-dehydro-3-deoxygluconokinase.
 
 
  0.538
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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