STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ08676.1ABC-2 type transport system ATP-binding protein. (307 aa)    
Predicted Functional Partners:
SCZ08668.1
ABC-2 family transporter protein.
 
  0.984
SCY48610.1
ABC-2 type transport system permease protein.
 
 0.787
SCY25551.1
ABC-2 type transport system permease protein.
  
 0.729
SCY97348.1
Hypothetical protein.
 
  0.707
SCY01147.1
Cu-processing system permease protein.
  
 0.693
SCY64868.1
ABC-2 type transport system permease protein.
  
 0.687
SCZ08684.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
     0.686
SCY01106.1
Copper chaperone NosL.
  
 0.665
SCY96558.1
ABC-2 type transport system permease protein.
  
 
 0.609
SCZ05699.1
Putative ABC transport system ATP-binding protein.
  
 
 
0.574
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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