STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ10200.1Protein of unknown function. (54 aa)    
Predicted Functional Partners:
SCY84345.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.924
SCZ10205.1
Uncharacterized protein YoxC, contains an MCP-like domain.
       0.744
SCZ10216.1
Heat induced stress protein YflT.
       0.620
SCY40994.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
   
    0.527
SCZ10222.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
     0.502
SCY71599.1
Uncharacterised nucleotidyltransferase.
   
    0.467
SCZ10212.1
Hypothetical protein.
       0.453
SCY96665.1
ABC-2 type transport system permease protein/lipopolysaccharide transport system permease protein.
   
    0.437
Your Current Organism:
Paenibacillus polysaccharolyticus
NCBI taxonomy Id: 582692
Other names: ICMP 17623, NBRC 105191, P. polysaccharolyticus, Paenibacillus polysaccharolyticus Madhaiyan et al. 2017, Paenibacillus sp. BL9, strain BL9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.