STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK24715.1Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (506 aa)    
Predicted Functional Partners:
SFK24687.1
Membrane fusion protein, multidrug efflux system.
 
 
 0.960
SFK24657.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
 
    0.838
SFK23600.1
Membrane fusion protein, multidrug efflux system.
  
   0.808
SFL06726.1
Membrane fusion protein, multidrug efflux system.
 
 
 0.807
SFK24744.1
MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB.
       0.787
SFL08894.1
Membrane fusion protein, multidrug efflux system.
 
   0.764
SFK49036.1
Membrane fusion protein, multidrug efflux system.
  
   0.718
SFK38693.1
Membrane fusion protein, multidrug efflux system.
  
   0.704
SFK23571.1
Multidrug efflux pump.
 
   0.703
SFL08923.1
Multidrug efflux pump.
 
   0.679
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
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