STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK29157.1Calcineurin-like phosphoesterase. (449 aa)    
Predicted Functional Partners:
SFK29252.1
Hypothetical protein.
  
    0.786
SFK29207.1
Hypothetical protein.
       0.785
SFK29231.1
Hypothetical protein.
       0.785
SFK29182.1
Hypothetical protein.
       0.773
SFK65589.1
Hypothetical protein.
  
 
 
 0.750
SFL16294.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
   
 
 0.725
SFK59765.1
Hypothetical protein.
    
 
 0.716
SFK83081.1
Putative polyhydroxyalkanoic acid system protein.
  
     0.501
SFK29132.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
       0.470
SFK89117.1
Signal transduction histidine kinase.
  
  
 0.455
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.