STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK49754.1Asparagine synthase (glutamine-hydrolysing). (557 aa)    
Predicted Functional Partners:
SFK49795.1
UDP-GlcNAc3NAcA epimerase.
 
    0.821
SFK49776.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.776
SFK49816.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.572
SFK49659.1
UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase.
 
     0.567
SFK40551.1
Homoserine dehydrogenase.
  
  
 0.542
SFK49617.1
UDP-N-acetyl-D-galactosamine dehydrogenase.
 
    0.511
SFK70009.1
Aspartate kinase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 0.480
SFK49704.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.472
SFK49640.1
UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase.
       0.464
SFK49682.1
UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase.
  
    0.457
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.