STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK61716.1Protein of unknown function. (71 aa)    
Predicted Functional Partners:
SFK61747.1
Uncharacterized membrane protein YccC.
 
   
 0.953
SFK61686.1
Multidrug resistance efflux pump.
 
     0.817
SFL06808.1
Uncharacterized membrane protein YccC.
 
   
 0.803
SFK61789.1
Transcriptional regulator, MarR family.
       0.787
SFK37733.1
Pilin (type 1 fimbria component protein).
  
     0.685
SFK34520.1
Hypothetical protein.
  
     0.618
SFK34426.1
Hypothetical protein.
  
     0.611
SFL06069.1
Motility quorum-sensing regulator / GCU-specific mRNA interferase toxin.
  
     0.603
SFK20580.1
Cytochrome c, mono-and diheme variants.
  
     0.576
SFL01741.1
Glyoxylase I family protein.
  
     0.573
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.