STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK82892.1LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. (330 aa)    
Predicted Functional Partners:
SFL13539.1
DNA-binding transcriptional regulator, LysR family.
  
     0.764
SFK35648.1
DNA-binding transcriptional regulator, LysR family.
  
     0.755
SFL08870.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.734
SFK34929.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.705
SFK39063.1
DNA-binding transcriptional regulator, LysR family.
  
     0.672
SFK38442.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.647
SFL11125.1
DNA-binding transcriptional regulator, LysR family.
  
     0.567
acnA
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
       0.473
SFL00771.1
DNA-binding transcriptional regulator, LysR family.
  
     0.473
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.