STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK89009.1DNA-binding transcriptional regulator, AcrR family. (192 aa)    
Predicted Functional Partners:
SFK89030.1
Lysophospholipase, alpha-beta hydrolase superfamily.
 
     0.646
SFK59315.1
Hypothetical protein.
  
     0.638
SFL11973.1
Hypothetical protein.
  
     0.593
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
       0.509
SFK89046.1
acyl-CoA dehydrogenase.
       0.490
SFL22144.1
Uncharacterized membrane protein.
  
     0.485
SFL28024.1
Na+/proline symporter.
 
   
 0.443
TolA
Cell division and transport-associated protein TolA.
  
     0.435
SFK70081.1
Hypothetical protein.
  
     0.433
SFK45937.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.