STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK92737.1Lipoate-protein ligase A. (257 aa)    
Predicted Functional Partners:
SFK92719.1
Lipoate-protein ligase A.
    0.994
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 
 0.936
lpdA-2
Dihydrolipoamide dehydrogenase.
 
 0.931
SFK23777.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.920
LipA
Lipoic acid synthetase.
  
 
 0.918
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 
 0.918
odhB
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.743
SFK98305.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.740
lpdA
Dihydrolipoamide dehydrogenase.
 
 
 0.738
SFK77923.1
NADPH-glutathione reductase.
 
 
 0.730
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
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