Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK69725.1 | SFL14032.1 | SAMN05192579_105165 | SAMN05192579_11624 | Hypothetical protein. | Hypothetical protein. | 0.605 |
SFL03799.1 | SFL14032.1 | SAMN05192579_11235 | SAMN05192579_11624 | SET domain-containing protein. | Hypothetical protein. | 0.605 |
SFL04082.1 | SFL14032.1 | SAMN05192579_11249 | SAMN05192579_11624 | Zinc carboxypeptidase. | Hypothetical protein. | 0.626 |
SFL13741.1 | SFL14032.1 | SAMN05192579_11612 | SAMN05192579_11624 | Predicted ATP-binding protein involved in virulence. | Hypothetical protein. | 0.400 |
SFL14032.1 | SFK69725.1 | SAMN05192579_11624 | SAMN05192579_105165 | Hypothetical protein. | Hypothetical protein. | 0.605 |
SFL14032.1 | SFL03799.1 | SAMN05192579_11624 | SAMN05192579_11235 | Hypothetical protein. | SET domain-containing protein. | 0.605 |
SFL14032.1 | SFL04082.1 | SAMN05192579_11624 | SAMN05192579_11249 | Hypothetical protein. | Zinc carboxypeptidase. | 0.626 |
SFL14032.1 | SFL13741.1 | SAMN05192579_11624 | SAMN05192579_11612 | Hypothetical protein. | Predicted ATP-binding protein involved in virulence. | 0.400 |
SFL14032.1 | SFL14054.1 | SAMN05192579_11624 | SAMN05192579_11625 | Hypothetical protein. | Penicillin-binding protein 1C. | 0.959 |
SFL14032.1 | SFL14115.1 | SAMN05192579_11624 | SAMN05192579_11627 | Hypothetical protein. | Uncharacterized protein; Belongs to the UPF0149 family. | 0.450 |
SFL14032.1 | SerA | SAMN05192579_11624 | SAMN05192579_1173 | Hypothetical protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.554 |
SFL14032.1 | nrdR | SAMN05192579_11624 | SAMN05192579_103270 | Hypothetical protein. | Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.567 |
SFL14032.1 | xth-2 | SAMN05192579_11624 | SAMN05192579_11626 | Hypothetical protein. | Exodeoxyribonuclease III. | 0.450 |
SFL14054.1 | SFL14032.1 | SAMN05192579_11625 | SAMN05192579_11624 | Penicillin-binding protein 1C. | Hypothetical protein. | 0.959 |
SFL14054.1 | SFL14115.1 | SAMN05192579_11625 | SAMN05192579_11627 | Penicillin-binding protein 1C. | Uncharacterized protein; Belongs to the UPF0149 family. | 0.450 |
SFL14054.1 | xth-2 | SAMN05192579_11625 | SAMN05192579_11626 | Penicillin-binding protein 1C. | Exodeoxyribonuclease III. | 0.450 |
SFL14115.1 | SFL14032.1 | SAMN05192579_11627 | SAMN05192579_11624 | Uncharacterized protein; Belongs to the UPF0149 family. | Hypothetical protein. | 0.450 |
SFL14115.1 | SFL14054.1 | SAMN05192579_11627 | SAMN05192579_11625 | Uncharacterized protein; Belongs to the UPF0149 family. | Penicillin-binding protein 1C. | 0.450 |
SFL14115.1 | xth-2 | SAMN05192579_11627 | SAMN05192579_11626 | Uncharacterized protein; Belongs to the UPF0149 family. | Exodeoxyribonuclease III. | 0.788 |
SerA | SFL14032.1 | SAMN05192579_1173 | SAMN05192579_11624 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.554 |
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