STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL18424.1Two component transcriptional regulator, winged helix family. (221 aa)    
Predicted Functional Partners:
SFL18402.1
Signal transduction histidine kinase.
 
   0.948
SFK82246.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.892
SFK50633.1
Signal transduction histidine kinase.
 
 
 0.847
SFK58112.1
Two-component system, OmpR family, sensor histidine kinase TctE.
  
   0.835
SFK89117.1
Signal transduction histidine kinase.
  
 
0.833
SFL00361.1
Two-component system, OmpR family, sensor kinase.
  
 
 0.829
SFL17841.1
Two-component system, OmpR family, sensor histidine kinase TctE.
  
   0.827
SFK50296.1
Signal transduction histidine kinase.
  
   0.822
PhoR
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
 0.818
SFK58637.1
Signal transduction histidine kinase.
 
 
 0.811
Your Current Organism:
Rhodanobacter glycinis
NCBI taxonomy Id: 582702
Other names: ICMP 17626, NBRC 105007, R. glycinis, Rhodanobacter glycinis Madhaiyan et al. 2014, Rhodanobacter sp. MO64, strain MO64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.