STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT50089.1KEGG: mfa:Mfla_1337 hypothetical protein. (180 aa)    
Predicted Functional Partners:
ACT50090.1
KEGG: mfa:Mfla_1338 putative transmembrane protein.
 
     0.949
ACT50092.1
KEGG: mfa:Mfla_1340 hypothetical protein.
 
     0.949
ACT50091.1
KEGG: mfa:Mfla_1339 hypothetical protein.
 
     0.948
ACT50088.1
PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: mfa:Mfla_1336 type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.943
ACT50087.1
Protein involved in methylation; KEGG: mfa:Mfla_1335 methylation.
 
     0.940
ACT50085.1
KEGG: mfa:Mfla_1333 hypothetical protein.
 
     0.936
ACT50086.1
PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1334 methylation.
 
     0.882
ACT50094.1
PFAM: type II secretion system protein; KEGG: mfa:Mfla_1342 type II secretion system protein.
 
     0.849
ACT50093.1
PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_1341 type II secretion system protein E.
 
     0.819
ACT50275.1
KEGG: ppg:PputGB1_2456 hypothetical protein.
 
     0.779
Your Current Organism:
Methylovorus glucosetrophus
NCBI taxonomy Id: 582744
Other names: M. glucosetrophus SIP3-4, Methylovorus glucosetrophus SIP3-4, Methylovorus glucosetrophus str. SIP3-4, Methylovorus glucosetrophus strain SIP3-4, Methylovorus sp. SIP3-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.