Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACT50254.1PFAM: PsiF repeat protein; KEGG: mfa:Mfla_2601 PsiF. (132 aa)    
Predicted Functional Partners:
ACT50302.1
PFAM: AsmA family protein; KEGG: mfa:Mfla_1200 AsmA.
  
     0.488
ACT50255.1
Type I secretion system ATPase; KEGG: azo:azo0646 toxin secretion ABC transporter permease and ATP-binding protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase.
       0.461
ACT50256.1
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_3201 type I secretion membrane fusion protein, HlyD.
       0.461
ACT50257.1
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: azo:azo0648 LuxR family transcriptional regulator.
       0.461
ACT50401.1
KEGG: mfa:Mfla_0717 hypothetical protein.
  
     0.451
ACT50558.1
Putative phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
  
     0.443
ACT51893.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: azo:azo3667 hypothetical protein.
  
    0.423
Your Current Organism:
Methylovorus glucosetrophus
NCBI taxonomy Id: 582744
Other names: M. glucosetrophus SIP3-4, Methylovorus glucosetrophus SIP3-4, Methylovorus glucosetrophus str. SIP3-4, Methylovorus glucosetrophus strain SIP3-4, Methylovorus sp. SIP3-4
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