STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162665_00753Unannotated protein. (304 aa)    
Predicted Functional Partners:
OSO01_26320
Unannotated protein.
    
 0.750
thrC
Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
    
 0.512
ectB
Unannotated protein; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.480
OSO01_41730
Unannotated protein.
    
  0.469
OSO01_30400
Unannotated protein.
    
  0.469
GCA_900162665_00751
Unannotated protein.
       0.456
GCA_900162665_00752
Unannotated protein.
       0.456
ybgG
Unannotated protein.
    
  0.452
GCA_900162665_00749
Unannotated protein.
  
    0.428
GCA_900162665_00750
Unannotated protein.
       0.424
Your Current Organism:
Oceanobacillus sojae
NCBI taxonomy Id: 582851
Other names: CIP 109918, JCM 15792, NRRL B-59181, O. sojae, Oceanobacillus soja, Oceanobacillus sojae corrig. Tominaga et al. 2009, Oceanobacillus sp. Y27, strain Y27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.