STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSO01_18420Unannotated protein. (262 aa)    
Predicted Functional Partners:
PTS-EII_2
Unannotated protein.
 0.992
OSO01_17220
Unannotated protein.
 
 0.991
PTS-EII_1
Unannotated protein.
 
 0.987
GCA_900162665_01848
Unannotated protein.
 
 0.987
OSO01_18400
Unannotated protein.
 
 0.985
OSO01_17450
Unannotated protein.
 0.968
OSO01_18680
Unannotated protein.
 0.967
OSO01_37360
Unannotated protein.
 0.966
GCA_900162665_01850
Unannotated protein.
 0.966
PTS-EII_5
Unannotated protein.
 0.958
Your Current Organism:
Oceanobacillus sojae
NCBI taxonomy Id: 582851
Other names: CIP 109918, JCM 15792, NRRL B-59181, O. sojae, Oceanobacillus soja, Oceanobacillus sojae corrig. Tominaga et al. 2009, Oceanobacillus sp. Y27, strain Y27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.