Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_900162665_00779 | ysaA | GCA_900162665_00779 | GCA_900162665_01120 | Unannotated protein. | Unannotated protein. | 0.540 |
OSO01_23390 | cinA | GCA_900162665_01158 | GCA_900162665_00454 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.896 |
OSO01_23390 | comEB | GCA_900162665_01158 | GCA_900162665_00488 | Unannotated protein. | Unannotated protein. | 0.461 |
OSO01_23390 | guaA | GCA_900162665_01158 | GCA_900162665_03631 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.907 |
OSO01_23390 | guaB | GCA_900162665_01158 | GCA_900162665_02085 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.808 |
OSO01_23390 | ribD | GCA_900162665_01158 | GCA_900162665_04350 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.882 |
OSO01_23390 | ysaA | GCA_900162665_01158 | GCA_900162665_01120 | Unannotated protein. | Unannotated protein. | 0.530 |
OSO01_45790 | ysaA | GCA_900162665_01637 | GCA_900162665_01120 | Unannotated protein. | Unannotated protein. | 0.517 |
cinA | OSO01_23390 | GCA_900162665_00454 | GCA_900162665_01158 | Unannotated protein; Belongs to the CinA family. | Unannotated protein. | 0.896 |
cinA | ysaA | GCA_900162665_00454 | GCA_900162665_01120 | Unannotated protein; Belongs to the CinA family. | Unannotated protein. | 0.765 |
comEB | OSO01_23390 | GCA_900162665_00488 | GCA_900162665_01158 | Unannotated protein. | Unannotated protein. | 0.461 |
comEB | dcd | GCA_900162665_00488 | GCA_900162665_03361 | Unannotated protein. | Unannotated protein; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.680 |
comEB | ysaA | GCA_900162665_00488 | GCA_900162665_01120 | Unannotated protein. | Unannotated protein. | 0.516 |
dcd | comEB | GCA_900162665_03361 | GCA_900162665_00488 | Unannotated protein; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | Unannotated protein. | 0.680 |
dcd | ysaA | GCA_900162665_03361 | GCA_900162665_01120 | Unannotated protein; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | Unannotated protein. | 0.533 |
guaA | OSO01_23390 | GCA_900162665_03631 | GCA_900162665_01158 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.907 |
guaA | guaB | GCA_900162665_03631 | GCA_900162665_02085 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaA | ribD | GCA_900162665_03631 | GCA_900162665_04350 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.528 |
guaA | ysaA | GCA_900162665_03631 | GCA_900162665_01120 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.751 |
guaB | OSO01_23390 | GCA_900162665_02085 | GCA_900162665_01158 | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Unannotated protein. | 0.808 |
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