Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSO01_34650 | OSO01_34660 | GCA_900162665_01403 | GCA_900162665_01402 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
OSO01_34650 | OSO01_34670 | GCA_900162665_01403 | GCA_900162665_01401 | Unannotated protein. | Unannotated protein. | 0.702 |
OSO01_34650 | OSO01_41880 | GCA_900162665_01403 | GCA_900162665_01610 | Unannotated protein. | Unannotated protein. | 0.634 |
OSO01_34650 | bfmbC | GCA_900162665_01403 | GCA_900162665_02414 | Unannotated protein. | Unannotated protein. | 0.672 |
OSO01_34650 | gcvH | GCA_900162665_01403 | GCA_900162665_01329 | Unannotated protein. | Unannotated protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.986 |
OSO01_34650 | gcvT | GCA_900162665_01403 | GCA_900162665_00581 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.983 |
OSO01_34650 | gltA | GCA_900162665_01403 | GCA_900162665_02429 | Unannotated protein. | Unannotated protein. | 0.927 |
OSO01_34650 | glyA | GCA_900162665_01403 | GCA_900162665_01510 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.889 |
OSO01_34650 | pdhD | GCA_900162665_01403 | GCA_900162665_00253 | Unannotated protein. | Unannotated protein. | 0.636 |
OSO01_34660 | OSO01_34650 | GCA_900162665_01402 | GCA_900162665_01403 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein. | 0.999 |
OSO01_34660 | OSO01_34670 | GCA_900162665_01402 | GCA_900162665_01401 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein. | 0.748 |
OSO01_34660 | OSO01_41880 | GCA_900162665_01402 | GCA_900162665_01610 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein. | 0.617 |
OSO01_34660 | bfmbC | GCA_900162665_01402 | GCA_900162665_02414 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein. | 0.821 |
OSO01_34660 | gcvH | GCA_900162665_01402 | GCA_900162665_01329 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. | 0.979 |
OSO01_34660 | gcvPB | GCA_900162665_01402 | GCA_900162665_00583 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. | 0.999 |
OSO01_34660 | gcvT | GCA_900162665_01402 | GCA_900162665_00581 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.994 |
OSO01_34660 | gltA | GCA_900162665_01402 | GCA_900162665_02429 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein. | 0.923 |
OSO01_34660 | glyA | GCA_900162665_01402 | GCA_900162665_01510 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.782 |
OSO01_34660 | pdhD | GCA_900162665_01402 | GCA_900162665_00253 | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Unannotated protein. | 0.803 |
OSO01_34670 | OSO01_34650 | GCA_900162665_01401 | GCA_900162665_01403 | Unannotated protein. | Unannotated protein. | 0.702 |
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