STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSO01_35670Unannotated protein. (442 aa)    
Predicted Functional Partners:
nagE
Unannotated protein.
 
 
 0.939
GCA_900162665_00944
Unannotated protein.
 
 
 0.929
ptsG
Unannotated protein.
  
 
 0.920
crr
Unannotated protein.
  
 
 0.920
GCA_900162665_01597
Unannotated protein.
  
 
 0.920
bglF
Unannotated protein.
  
 
 0.920
OSO01_31610
Unannotated protein.
 
 
 0.911
OSO01_35680
Unannotated protein; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides.
 
  
 0.847
OSO01_31620
Unannotated protein.
 
 
 0.808
OSO01_08860
Unannotated protein.
 
 
 0.785
Your Current Organism:
Oceanobacillus sojae
NCBI taxonomy Id: 582851
Other names: CIP 109918, JCM 15792, NRRL B-59181, O. sojae, Oceanobacillus soja, Oceanobacillus sojae corrig. Tominaga et al. 2009, Oceanobacillus sp. Y27, strain Y27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.