Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSO01_02970 | gltB | GCA_900162665_02526 | GCA_900162665_02428 | Unannotated protein. | Unannotated protein. | 0.887 |
OSO01_36350 | OSO01_40220 | GCA_900162665_01661 | GCA_900162665_03654 | Unannotated protein. | Unannotated protein; Belongs to the glutamate synthase family. | 0.475 |
OSO01_36350 | gdhA | GCA_900162665_01661 | GCA_900162665_02361 | Unannotated protein. | Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.853 |
OSO01_36350 | glnA_1 | GCA_900162665_01661 | GCA_900162665_02423 | Unannotated protein. | Unannotated protein. | 0.596 |
OSO01_36350 | gltA | GCA_900162665_01661 | GCA_900162665_02429 | Unannotated protein. | Unannotated protein. | 0.920 |
OSO01_36350 | gltB | GCA_900162665_01661 | GCA_900162665_02428 | Unannotated protein. | Unannotated protein. | 0.874 |
OSO01_36350 | purF | GCA_900162665_01661 | GCA_900162665_03211 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.431 |
OSO01_36350 | pyrD | GCA_900162665_01661 | GCA_900162665_00326 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.720 |
OSO01_36350 | pyrK | GCA_900162665_01661 | GCA_900162665_00325 | Unannotated protein. | Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.610 |
OSO01_36350 | yerD | GCA_900162665_01661 | GCA_900162665_01929 | Unannotated protein. | Unannotated protein; Belongs to the glutamate synthase family. | 0.475 |
OSO01_40220 | OSO01_36350 | GCA_900162665_03654 | GCA_900162665_01661 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein. | 0.475 |
OSO01_40220 | gdhA | GCA_900162665_03654 | GCA_900162665_02361 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.793 |
OSO01_40220 | glnA_1 | GCA_900162665_03654 | GCA_900162665_02423 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein. | 0.599 |
OSO01_40220 | gltA | GCA_900162665_03654 | GCA_900162665_02429 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein. | 0.993 |
OSO01_40220 | gltB | GCA_900162665_03654 | GCA_900162665_02428 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein. | 0.984 |
OSO01_40220 | purF | GCA_900162665_03654 | GCA_900162665_03211 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.529 |
OSO01_40220 | pyrK | GCA_900162665_03654 | GCA_900162665_00325 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.482 |
OSO01_40220 | yerD | GCA_900162665_03654 | GCA_900162665_01929 | Unannotated protein; Belongs to the glutamate synthase family. | Unannotated protein; Belongs to the glutamate synthase family. | 0.593 |
gdhA | OSO01_36350 | GCA_900162665_02361 | GCA_900162665_01661 | Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Unannotated protein. | 0.853 |
gdhA | OSO01_40220 | GCA_900162665_02361 | GCA_900162665_03654 | Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Unannotated protein; Belongs to the glutamate synthase family. | 0.793 |
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