STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSO01_26250Unannotated protein. (375 aa)    
Predicted Functional Partners:
hutU
Unannotated protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
 
 0.826
hutH
Unannotated protein.
  
  
 0.706
OSO01_42360
Unannotated protein.
  
    0.685
OSO01_26260
Unannotated protein.
 
     0.628
hutG
Unannotated protein; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
  
 
 0.514
gpuA
Unannotated protein; Belongs to the arginase family.
  
 
 0.514
Your Current Organism:
Oceanobacillus sojae
NCBI taxonomy Id: 582851
Other names: CIP 109918, JCM 15792, NRRL B-59181, O. sojae, Oceanobacillus soja, Oceanobacillus sojae corrig. Tominaga et al. 2009, Oceanobacillus sp. Y27, strain Y27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.