Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_900162665_04604 | GCA_900162665_04605 | GCA_900162665_04604 | GCA_900162665_04605 | Unannotated protein. | Unannotated protein. | 0.951 |
GCA_900162665_04604 | GCA_900162665_04606 | GCA_900162665_04604 | GCA_900162665_04606 | Unannotated protein. | Unannotated protein. | 0.525 |
GCA_900162665_04605 | GCA_900162665_04604 | GCA_900162665_04605 | GCA_900162665_04604 | Unannotated protein. | Unannotated protein. | 0.951 |
GCA_900162665_04605 | GCA_900162665_04606 | GCA_900162665_04605 | GCA_900162665_04606 | Unannotated protein. | Unannotated protein. | 0.525 |
GCA_900162665_04606 | GCA_900162665_04604 | GCA_900162665_04606 | GCA_900162665_04604 | Unannotated protein. | Unannotated protein. | 0.525 |
GCA_900162665_04606 | GCA_900162665_04605 | GCA_900162665_04606 | GCA_900162665_04605 | Unannotated protein. | Unannotated protein. | 0.525 |
GCA_900162665_04606 | OSO01_12520 | GCA_900162665_04606 | GCA_900162665_00377 | Unannotated protein. | Unannotated protein. | 0.596 |
GCA_900162665_04606 | OSO01_18850 | GCA_900162665_04606 | GCA_900162665_01196 | Unannotated protein. | Unannotated protein. | 0.767 |
GCA_900162665_04606 | cinA | GCA_900162665_04606 | GCA_900162665_00454 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.494 |
GCA_900162665_04606 | comEC | GCA_900162665_04606 | GCA_900162665_00489 | Unannotated protein. | Unannotated protein. | 0.452 |
GCA_900162665_04606 | motA | GCA_900162665_04606 | GCA_900162665_01179 | Unannotated protein. | Unannotated protein. | 0.438 |
GCA_900162665_04606 | mreC | GCA_900162665_04606 | GCA_900162665_02486 | Unannotated protein. | Unannotated protein; Involved in formation and maintenance of cell shape. | 0.806 |
GCA_900162665_04606 | mutL | GCA_900162665_04606 | GCA_900162665_00463 | Unannotated protein. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.579 |
GCA_900162665_04606 | mutS_1 | GCA_900162665_04606 | GCA_900162665_00462 | Unannotated protein. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.580 |
OSO01_12520 | GCA_900162665_04606 | GCA_900162665_00377 | GCA_900162665_04606 | Unannotated protein. | Unannotated protein. | 0.596 |
OSO01_12520 | OSO01_18850 | GCA_900162665_00377 | GCA_900162665_01196 | Unannotated protein. | Unannotated protein. | 0.910 |
OSO01_12520 | cinA | GCA_900162665_00377 | GCA_900162665_00454 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.431 |
OSO01_12520 | comEC | GCA_900162665_00377 | GCA_900162665_00489 | Unannotated protein. | Unannotated protein. | 0.869 |
OSO01_12520 | motA | GCA_900162665_00377 | GCA_900162665_01179 | Unannotated protein. | Unannotated protein. | 0.535 |
OSO01_18850 | GCA_900162665_04606 | GCA_900162665_01196 | GCA_900162665_04606 | Unannotated protein. | Unannotated protein. | 0.767 |
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