STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hden_2424TIGRFAM: protein TolA; KEGG: mpo:Mpop_5303 protein TolA. (384 aa)    
Predicted Functional Partners:
Hden_2425
Protein TolR; KEGG: azc:AZC_0522 biopolymer transport protein; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR.
  
 
 0.933
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.911
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.783
Hden_0281
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rru:Rru_A2154 biopolymer transport protein ExbD/TolR.
  
 
 0.652
Hden_0746
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: mes:Meso_2063 TonB-dependent receptor.
   
 
 0.564
Hden_2444
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
 
     0.563
Hden_0282
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mno:Mnod_1395 MotA/TolQ/ExbB proton channel.
  
 
 0.542
Hden_0259
PFAM: AsmA family protein; KEGG: mlo:mll1482 hypothetical protein.
  
    0.533
Hden_1630
PFAM: Apolipoprotein A1/A4/E; KEGG: rhi:NGR_c16680 kinesin-like protein.
 
   
 0.499
Hden_3162
KEGG: bja:bll0161 hypothetical protein.
  
     0.486
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.