STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hden_2459NAD(P)H quinone oxidoreductase, PIG3 family; KEGG: rru:Rru_A1056 zinc-containing alcohol dehydrogenase superfamily protein; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (336 aa)    
Predicted Functional Partners:
Hden_0554
PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1503 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.901
Hden_0557
PFAM: Beta-ketoacyl synthase; KEGG: rpe:RPE_2020 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.901
Hden_1341
PFAM: Beta-ketoacyl synthase; phosphopantetheine-binding; Acyl transferase; aminotransferase class-III; KEGG: npu:Npun_R6590 beta-ketoacyl synthase.
    
 0.867
Hden_2457
PFAM: protein of unknown function DUF1192; KEGG: mag:amb2678 hypothetical protein.
       0.619
Hden_2458
Hypothetical protein.
       0.568
Hden_1709
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.545
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.