Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hden_2369 | Hden_3366 | Hden_2369 | Hden_3366 | PFAM: Usg family protein; KEGG: pzu:PHZ_c3229 usg protein, probable subunit of phosphoribosylanthranilate isomerase. | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | 0.404 |
Hden_3365 | Hden_3366 | Hden_3365 | Hden_3366 | Hypothetical protein; KEGG: nvi:100117425 similar to kuzbanian. | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | 0.492 |
Hden_3365 | leuD | Hden_3365 | Hden_3363 | Hypothetical protein; KEGG: nvi:100117425 similar to kuzbanian. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.499 |
Hden_3366 | Hden_2369 | Hden_3366 | Hden_2369 | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | PFAM: Usg family protein; KEGG: pzu:PHZ_c3229 usg protein, probable subunit of phosphoribosylanthranilate isomerase. | 0.404 |
Hden_3366 | Hden_3365 | Hden_3366 | Hden_3365 | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | Hypothetical protein; KEGG: nvi:100117425 similar to kuzbanian. | 0.492 |
Hden_3366 | Hden_3367 | Hden_3366 | Hden_3367 | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | PFAM: Methyltransferase type 11; KEGG: methyltransferase domain-containing protein. | 0.566 |
Hden_3366 | leuD | Hden_3366 | Hden_3363 | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.416 |
Hden_3367 | Hden_3366 | Hden_3367 | Hden_3366 | PFAM: Methyltransferase type 11; KEGG: methyltransferase domain-containing protein. | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | 0.566 |
leuD | Hden_3365 | Hden_3363 | Hden_3365 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Hypothetical protein; KEGG: nvi:100117425 similar to kuzbanian. | 0.499 |
leuD | Hden_3366 | Hden_3363 | Hden_3366 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | PFAM: protein of unknown function DUF1025; KEGG: hypothetical protein. | 0.416 |