Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_0100PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mfa:Mfla_1558 biopolymer transport protein ExbD/TolR. (135 aa)    
Predicted Functional Partners:
Mmol_0101
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1559 MotA/TolQ/ExbB proton channel.
 
 
 0.975
Mmol_0102
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.905
Mmol_2107
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_1021 MotA/TolQ/ExbB proton channel.
 
 
 0.891
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.882
Mmol_0646
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mfa:Mfla_2092 MotA/TolQ/ExbB proton channel.
  
   0.694
Mmol_2108
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.651
Mmol_0103
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mfa:Mfla_1561 ABC transporter related.
       0.631
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.613
Mmol_2039
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mfa:Mfla_2306 TonB-like protein.
  
   0.585
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.554
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.