Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mmol_0108PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1547 TonB-dependent receptor. (789 aa)    
Predicted Functional Partners:
Mmol_1653
KEGG: mfa:Mfla_0324 hypothetical protein.
  
     0.672
Mmol_0102
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.570
Mmol_0112
KEGG: mfa:Mfla_1565 monooxygenase, putative.
 
     0.565
Mmol_0104
KEGG: cja:CJA_2331 putative dibenzothiophene desulfurization enzyme B.
 
     0.546
Mmol_0105
KEGG: bcm:Bcenmc03_3990 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein.
 
     0.537
Mmol_1566
KEGG: mfa:Mfla_0546 hypothetical protein.
  
     0.534
Mmol_0109
PFAM: major facilitator superfamily MFS_1; KEGG: cja:CJA_2350 tranpsorter, major facilitator family subfamily.
       0.478
Mmol_2108
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.471
Mmol_2289
KEGG: dar:Daro_1084 hypothetical protein.
  
     0.444
Mmol_0110
KEGG: mfa:Mfla_1535 alkanesulfonate monooxygenase.
 
     0.405
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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