STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1059PFAM: electron transport protein SCO1/SenC; KEGG: ilo:IL0764 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Mmol_1061
KEGG: msl:Msil_1519 nitrite reductase, copper-containing; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; multicopper oxidase type 2; cytochrome c class I.
 
   
 0.960
Mmol_1060
PFAM: protein of unknown function DUF323; KEGG: bba:Bd2607 hypothetical protein.
 
   
 0.917
Mmol_0554
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.810
Mmol_1058
PFAM: protein of unknown function DUF59; KEGG: bpr:GBP346_A2860 mrp protein.
       0.773
Mmol_0158
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nmu:Nmul_A2682 thioredoxin.
 
   0.665
Mmol_2025
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2118 thioredoxin.
 
   0.648
Mmol_1057
KEGG: eba:ebA6257 hypothetical protein.
       0.507
Mmol_0547
PFAM: cytochrome oxidase assembly; KEGG: tbd:Tbd_0334 putative cytochrome aa3 oxidase assembly protein,related to CtaA.
 
 
 0.502
Mmol_0514
PFAM: protein of unknown function DUF461; KEGG: rpi:Rpic_3713 protein of unknown function DUF461.
 
   
 0.460
Mmol_0552
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dar:Daro_1468 cytochrome c oxidase assembly protein.
  
 
 0.450
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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