STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmol_1068PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mfa:Mfla_1351 TonB-dependent receptor. (1227 aa)    
Predicted Functional Partners:
Mmol_1102
KEGG: mfa:Mfla_0692 von Willebrand factor, type A.
  
     0.713
Mmol_1105
KEGG: mfa:Mfla_0689 MxaA protein, putative.
  
     0.694
Mmol_2090
KEGG: mfa:Mfla_2357 putative signal peptide protein.
  
     0.648
Mmol_1276
PFAM: Propeptide PepSY amd peptidase M4; KEGG: mfa:Mfla_1052 peptidase.
  
     0.647
Mmol_1546
KEGG: mfa:Mfla_1900 von Willebrand factor, type A.
  
     0.638
Mmol_1104
SMART: von Willebrand factor type A; KEGG: mfa:Mfla_0690 von Willebrand factor, type A.
  
     0.620
Mmol_1543
KEGG: mfa:Mfla_1897 hypothetical protein.
  
     0.615
Mmol_1329
KEGG: mfa:Mfla_1631 hypothetical protein.
  
     0.585
Mmol_2040
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_2307 periplasmic sensor signal transduction histidine kinase.
  
     0.565
Mmol_1545
KEGG: mfa:Mfla_1899 hypothetical protein.
  
     0.561
Your Current Organism:
Methylotenera mobilis JLW8
NCBI taxonomy Id: 583345
Other names: M. mobilis JLW8, Methylotenera mobilis str. JLW8, Methylotenera mobilis strain JLW8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.